ENSGAFP00000001748 protein (Gambusia affinis)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ENSGAFP00000001748

Integrator complex subunit 6 like. (892 aa)

Predicted Functional Partners:

CCH79_00014075

0.982

CCH79_00008223

0.981

CCH79_00012570

0.975

CCH79_00000470

0.974

CCH79_00006413

0.971

CCH79_00006084

0.970

CCH79_00002214

0.970

CCH79_00020310

0.963

CCH79_00018413

0.960

CCH79_00014012

0.959

Your Current Organism:

Gambusia affinis

NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCH79_00000470	CCH79_00002214	ENSGAFP00000000585	ENSGAFP00000023081	Uncharacterized protein.	Uncharacterized protein.	0.999
CCH79_00000470	CCH79_00006084	ENSGAFP00000000585	ENSGAFP00000013473	Uncharacterized protein.	Uncharacterized protein.	0.999
CCH79_00000470	CCH79_00006413	ENSGAFP00000000585	ENSGAFP00000029584	Uncharacterized protein.	Uncharacterized protein.	0.999
CCH79_00000470	CCH79_00008223	ENSGAFP00000000585	ENSGAFP00000026738	Uncharacterized protein.	DUF3677 domain-containing protein.	0.999
CCH79_00000470	CCH79_00012570	ENSGAFP00000000585	ENSGAFP00000000739	Uncharacterized protein.	Uncharacterized protein.	0.999
CCH79_00000470	CCH79_00014012	ENSGAFP00000000585	ENSGAFP00000010475	Uncharacterized protein.	PHD-type domain-containing protein.	0.994
CCH79_00000470	CCH79_00014075	ENSGAFP00000000585	ENSGAFP00000019084	Uncharacterized protein.	Uncharacterized protein.	0.999
CCH79_00000470	CCH79_00018413	ENSGAFP00000000585	ENSGAFP00000027157	Uncharacterized protein.	Uncharacterized protein.	0.999
CCH79_00000470	CCH79_00020310	ENSGAFP00000000585	ENSGAFP00000027344	Uncharacterized protein.	Uncharacterized protein.	0.999
CCH79_00000470	ENSGAFP00000001748	ENSGAFP00000000585	ENSGAFP00000001748	Uncharacterized protein.	Integrator complex subunit 6 like.	0.974
CCH79_00002214	CCH79_00000470	ENSGAFP00000023081	ENSGAFP00000000585	Uncharacterized protein.	Uncharacterized protein.	0.999
CCH79_00002214	CCH79_00006084	ENSGAFP00000023081	ENSGAFP00000013473	Uncharacterized protein.	Uncharacterized protein.	0.998
CCH79_00002214	CCH79_00006413	ENSGAFP00000023081	ENSGAFP00000029584	Uncharacterized protein.	Uncharacterized protein.	0.997
CCH79_00002214	CCH79_00008223	ENSGAFP00000023081	ENSGAFP00000026738	Uncharacterized protein.	DUF3677 domain-containing protein.	0.999
CCH79_00002214	CCH79_00012570	ENSGAFP00000023081	ENSGAFP00000000739	Uncharacterized protein.	Uncharacterized protein.	0.999
CCH79_00002214	CCH79_00014012	ENSGAFP00000023081	ENSGAFP00000010475	Uncharacterized protein.	PHD-type domain-containing protein.	0.994
CCH79_00002214	CCH79_00014075	ENSGAFP00000023081	ENSGAFP00000019084	Uncharacterized protein.	Uncharacterized protein.	0.999
CCH79_00002214	CCH79_00018413	ENSGAFP00000023081	ENSGAFP00000027157	Uncharacterized protein.	Uncharacterized protein.	0.999
CCH79_00002214	CCH79_00020310	ENSGAFP00000023081	ENSGAFP00000027344	Uncharacterized protein.	Uncharacterized protein.	0.999
CCH79_00002214	ENSGAFP00000001748	ENSGAFP00000023081	ENSGAFP00000001748	Uncharacterized protein.	Integrator complex subunit 6 like.	0.970