STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00007500Uncharacterized protein. (551 aa)    
Predicted Functional Partners:
CCH79_00000571
Dystrobrevin.
    
 
 0.661
CCH79_00007979
Dystrobrevin.
    
 
 0.661
CCH79_00005386
Dystrobrevin.
    
 
 0.661
CCH79_00013301
Nitric oxide synthase; Produces nitric oxide (NO).
    
 
0.632
CCH79_00011342
PID domain-containing protein.
    
 
 0.606
CCH79_00001084
PID domain-containing protein.
    
 
 0.606
ENSGAFP00000022186
annotation not available
    
 
 0.606
CCH79_00001703
Uncharacterized protein.
      
 0.561
CCH79_00016593
Protein kinase domain-containing protein.
    
 0.554
ENSGAFP00000000077
annotation not available
    
 
 0.551
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.