Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00001836HIT domain-containing protein. (126 aa)    
Predicted Functional Partners:
CCH79_00018497
RRN7-type domain-containing protein.
    
 0.951
CCH79_00010533
Uncharacterized protein.
   
 0.821
CCH79_00003439
Uncharacterized protein.
   
 0.821
ENSGAFP00000007964
RRN3 homolog, RNA polymerase I transcription factor.
    
 0.801
CCH79_00007436
Uncharacterized protein.
   
  0.783
CCH79_00005889
SprT-like domain-containing protein.
    
 0.762
CCH79_00010394
Lysine--tRNA ligase.
   
 0.748
CCH79_00006941
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.692
CCH79_00006641
F-box domain-containing protein.
    
 0.692
ENSGAFP00000029234
Cyclin-dependent kinase 20.
    
 0.692
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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