STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAFP00000001775annotation not available (392 aa)    
Predicted Functional Partners:
CCH79_00019921
MBD domain-containing protein.
    
 0.778
CCH79_00006982
Fork-head domain-containing protein.
   
    0.746
CCH79_00002765
Homeobox domain-containing protein.
   
 
 0.706
CCH79_00001359
Deacetylase sirtuin-type domain-containing protein.
    
 0.701
CCH79_00008737
Uncharacterized protein.
    
 0.699
CCH79_00002763
Homeobox domain-containing protein.
   
 
 0.695
CCH79_00020614
Fork-head domain-containing protein.
   
  
 0.675
CCH79_00010803
IF rod domain-containing protein; Belongs to the intermediate filament family.
    
 0.657
CCH79_00011184
Homeobox domain-containing protein.
    
 
 0.643
CCH79_00002343
PINc domain-containing protein.
      
 0.606
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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