Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00014120Uncharacterized protein. (151 aa)    
Predicted Functional Partners:
CCH79_00001627
LID domain-containing protein.
    
 0.842
CCH79_00012715
LID domain-containing protein.
    
 0.842
CCH79_00005561
LID domain-containing protein.
    
 0.842
CCH79_00010361
LIM zinc-binding domain-containing protein.
   
 
 0.780
CCH79_00016103
Uncharacterized protein.
   
 
 0.780
ENSGAFP00000030209
Ketohexokinase.
    
   0.767
CCH79_00016720
Beta-1,3-N-acetylglucosaminyltransferase.
    
 
 0.766
CCH79_00015056
Beta-1,3-N-acetylglucosaminyltransferase.
    
 
 0.766
CCH79_00008231
Uncharacterized protein.
    
 
 0.766
CCH79_00020657
Uncharacterized protein.
      
 0.661
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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