Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAFP00000001845Si:ch1073-303k11.2. (260 aa)    
Predicted Functional Partners:
FIG4
SAC domain-containing protein.
      
 0.555
CCH79_00018191
Uncharacterized protein; Belongs to the WD repeat SEC13 family.
      
 0.546
ENSGAFP00000005087
Embryonal Fyn-associated substrate.
  
 
   0.482
ENSGAFP00000023775
annotation not available
    
  0.456
CCH79_00002598
Uncharacterized protein.
      
 0.432
ENSGAFP00000006438
annotation not available
  
 
 0.431
CCH79_00004240
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
    
  0.422
CCH79_00015382
BMP and activin membrane-bound inhibitor homolog; Negatively regulates TGF-beta signaling. Belongs to the BAMBI family.
      
 0.420
CCH79_00019618
Uncharacterized protein.
    
  0.408
CCH79_00013211
Uncharacterized protein; Belongs to the MAGUK family.
    
  0.406
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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