STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00012228Sema domain-containing protein; Belongs to the semaphorin family. (834 aa)    
Predicted Functional Partners:
ENSGAFP00000006400
annotation not available
    
 0.733
ENSGAFP00000006438
annotation not available
    
 0.733
ENSGAFP00000013015
Macrophage stimulating 1 receptor b.
    
 0.733
ENSGAFP00000015988
Macrophage stimulating 1 receptor a.
    
 0.733
CCH79_00019933
Plexin_cytopl domain-containing protein.
    
 0.650
CCH79_00019934
Uncharacterized protein.
    
 0.650
CCH79_00019936
Sema domain-containing protein.
    
 0.650
CCH79_00016351
Sema domain-containing protein.
    
 0.650
ENSGAFP00000012399
Plexin b1b.
    
0.650
ENSGAFP00000023107
Plexin b1a.
    
 0.650
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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