STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00001838Uncharacterized protein. (357 aa)    
Predicted Functional Partners:
CCH79_00004102
Uncharacterized protein.
    
 0.993
ENSGAFP00000007907
WD repeat domain 34.
    
 0.968
CCH79_00019915
Dynein light chain roadblock.
    
 0.939
ENSGAFP00000022894
Tctex1 domain containing 2.
   
 0.912
DYNLRB2
Robl_LC7 domain-containing protein.
    
 0.909
CCH79_00019912
Robl_LC7 domain-containing protein.
    
 0.909
CCH79_00005156
WD_REPEATS_REGION domain-containing protein.
    
 0.907
CCH79_00008500
Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.
   
 
0.898
CCH79_00007019
Dynein light chain.
    
 0.874
CCH79_00000401
Uncharacterized protein.
    
 0.873
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.