Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00018302Uncharacterized protein. (203 aa)    
Predicted Functional Partners:
CCH79_00009176
Uncharacterized protein.
   
 0.946
ENSGAFP00000024624
Syntaxin 5A.
   
 0.933
CCH79_00008412
Uncharacterized protein.
   
 0.930
ENSGAFP00000002040
C9orf72-SMCR8 complex subunit.
    
 0.926
CCH79_00009691
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
 0.926
ENSGAFP00000016327
Golgin A2.
    
 0.910
ENSGAFP00000010629
Sec1 family domain containing 1.
    
 0.909
CCH79_00016155
Uncharacterized protein.
    
 0.904
CCH79_00020127
Uncharacterized protein.
  
  
 
0.900
CCH79_00018314
SEC7 domain-containing protein.
    
 0.898
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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