CCH79_00016428 protein (Gambusia affinis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

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co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

CCH79_00016428

Uncharacterized protein. (161 aa)

Predicted Functional Partners:

TNNI2-4

0.980

TNNI2

0.977

TNNI2-2

0.977

TNNI2-3

0.977

CCH79_00020621

0.956

CCH79_00002905

0.954

CCH79_00014834

0.948

ENSGAFP00000024180

0.948

CCH79_00008105

0.933

CCH79_00017481

0.933

Your Current Organism:

Gambusia affinis

NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCH79_00002905	CCH79_00008105	ENSGAFP00000017155	ENSGAFP00000017252	Uncharacterized protein.	Uncharacterized protein.	0.985
CCH79_00002905	CCH79_00014834	ENSGAFP00000017155	ENSGAFP00000011033	Uncharacterized protein.	Uncharacterized protein.	0.887
CCH79_00002905	CCH79_00016428	ENSGAFP00000017155	ENSGAFP00000001895	Uncharacterized protein.	Uncharacterized protein.	0.954
CCH79_00002905	CCH79_00017481	ENSGAFP00000017155	ENSGAFP00000028603	Uncharacterized protein.	Uncharacterized protein.	0.985
CCH79_00002905	CCH79_00020621	ENSGAFP00000017155	ENSGAFP00000003616	Uncharacterized protein.	Uncharacterized protein.	0.799
CCH79_00002905	ENSGAFP00000024180	ENSGAFP00000017155	ENSGAFP00000024180	Uncharacterized protein.	Troponin I type 1b (skeletal, slow).	0.887
CCH79_00002905	TNNI2	ENSGAFP00000017155	ENSGAFP00000003232	Uncharacterized protein.	Uncharacterized protein.	0.887
CCH79_00002905	TNNI2-2	ENSGAFP00000017155	ENSGAFP00000003242	Uncharacterized protein.	Uncharacterized protein.	0.887
CCH79_00002905	TNNI2-3	ENSGAFP00000017155	ENSGAFP00000003270	Uncharacterized protein.	Troponin I2, fast skeletal type.	0.887
CCH79_00002905	TNNI2-4	ENSGAFP00000017155	ENSGAFP00000021514	Uncharacterized protein.	Troponin I2, fast skeletal type.	0.887
CCH79_00008105	CCH79_00002905	ENSGAFP00000017252	ENSGAFP00000017155	Uncharacterized protein.	Uncharacterized protein.	0.985
CCH79_00008105	CCH79_00014834	ENSGAFP00000017252	ENSGAFP00000011033	Uncharacterized protein.	Uncharacterized protein.	0.646
CCH79_00008105	CCH79_00016428	ENSGAFP00000017252	ENSGAFP00000001895	Uncharacterized protein.	Uncharacterized protein.	0.933
CCH79_00008105	CCH79_00017481	ENSGAFP00000017252	ENSGAFP00000028603	Uncharacterized protein.	Uncharacterized protein.	0.900
CCH79_00008105	CCH79_00020621	ENSGAFP00000017252	ENSGAFP00000003616	Uncharacterized protein.	Uncharacterized protein.	0.619
CCH79_00008105	ENSGAFP00000024180	ENSGAFP00000017252	ENSGAFP00000024180	Uncharacterized protein.	Troponin I type 1b (skeletal, slow).	0.646
CCH79_00008105	TNNI2	ENSGAFP00000017252	ENSGAFP00000003232	Uncharacterized protein.	Uncharacterized protein.	0.885
CCH79_00008105	TNNI2-2	ENSGAFP00000017252	ENSGAFP00000003242	Uncharacterized protein.	Uncharacterized protein.	0.885
CCH79_00008105	TNNI2-3	ENSGAFP00000017252	ENSGAFP00000003270	Uncharacterized protein.	Troponin I2, fast skeletal type.	0.885
CCH79_00008105	TNNI2-4	ENSGAFP00000017252	ENSGAFP00000021514	Uncharacterized protein.	Troponin I2, fast skeletal type.	0.885