STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00007503TYR_PHOSPHATASE_2 domain-containing protein. (170 aa)    
Predicted Functional Partners:
CCH79_00009691
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
 0.754
ENSGAFP00000000567
Cyclin and CBS domain divalent metal cation transport mediator 4b.
    
 
 0.601
CCH79_00001247
Uncharacterized protein.
    
 
 0.601
CCH79_00001249
CNNM transmembrane domain-containing protein.
    
 
 0.601
CCH79_00012739
CNNM transmembrane domain-containing protein.
    
 
 0.601
CNNM1
Uncharacterized protein.
    
 
 0.545
CNNM1-2
Uncharacterized protein.
    
 
 0.545
CCH79_00007591
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 
 0.500
ENSGAFP00000012246
Casein kinase 2, alpha 4 polypeptide.
   
 
 0.500
CCH79_00006360
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 
 0.500
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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