ENSGAFP00000001899 protein (Gambusia affinis)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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Co-expression

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[Homology]

Score

ENSGAFP00000001899

annotation not available (210 aa)

Predicted Functional Partners:

GNAZ

0.836

CCH79_00010691

0.730

ENSGAFP00000016137

0.726

ENSGAFP00000001786

0.678

CCH79_00012352

0.678

CCH79_00008393

0.678

CCH79_00012696

0.678

ENSGAFP00000015915

0.678

CCH79_00013058

0.678

ENSGAFP00000022133

0.678

Your Current Organism:

Gambusia affinis

NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCH79_00008393	CCH79_00010691	ENSGAFP00000010391	ENSGAFP00000001482	Uncharacterized protein.	Uncharacterized protein.	0.803
CCH79_00008393	CCH79_00012352	ENSGAFP00000010391	ENSGAFP00000009661	Uncharacterized protein.	Uncharacterized protein.	0.560
CCH79_00008393	CCH79_00012696	ENSGAFP00000010391	ENSGAFP00000015852	Uncharacterized protein.	Uncharacterized protein.	0.549
CCH79_00008393	CCH79_00013058	ENSGAFP00000010391	ENSGAFP00000022125	Uncharacterized protein.	Uncharacterized protein.	0.562
CCH79_00008393	ENSGAFP00000001899	ENSGAFP00000010391	ENSGAFP00000001899	Uncharacterized protein.	annotation not available	0.678
CCH79_00008393	ENSGAFP00000016137	ENSGAFP00000010391	ENSGAFP00000016137	Uncharacterized protein.	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.	0.566
CCH79_00010691	CCH79_00008393	ENSGAFP00000001482	ENSGAFP00000010391	Uncharacterized protein.	Uncharacterized protein.	0.803
CCH79_00010691	CCH79_00012352	ENSGAFP00000001482	ENSGAFP00000009661	Uncharacterized protein.	Uncharacterized protein.	0.795
CCH79_00010691	CCH79_00012696	ENSGAFP00000001482	ENSGAFP00000015852	Uncharacterized protein.	Uncharacterized protein.	0.800
CCH79_00010691	CCH79_00013058	ENSGAFP00000001482	ENSGAFP00000022125	Uncharacterized protein.	Uncharacterized protein.	0.797
CCH79_00010691	ENSGAFP00000001786	ENSGAFP00000001482	ENSGAFP00000001786	Uncharacterized protein.	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3.	0.566
CCH79_00010691	ENSGAFP00000001899	ENSGAFP00000001482	ENSGAFP00000001899	Uncharacterized protein.	annotation not available	0.730
CCH79_00010691	ENSGAFP00000015915	ENSGAFP00000001482	ENSGAFP00000015915	Uncharacterized protein.	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2b.	0.566
CCH79_00010691	ENSGAFP00000016137	ENSGAFP00000001482	ENSGAFP00000016137	Uncharacterized protein.	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.	0.928
CCH79_00010691	ENSGAFP00000022133	ENSGAFP00000001482	ENSGAFP00000022133	Uncharacterized protein.	annotation not available	0.566
CCH79_00012352	CCH79_00008393	ENSGAFP00000009661	ENSGAFP00000010391	Uncharacterized protein.	Uncharacterized protein.	0.560
CCH79_00012352	CCH79_00010691	ENSGAFP00000009661	ENSGAFP00000001482	Uncharacterized protein.	Uncharacterized protein.	0.795
CCH79_00012352	CCH79_00012696	ENSGAFP00000009661	ENSGAFP00000015852	Uncharacterized protein.	Uncharacterized protein.	0.555
CCH79_00012352	CCH79_00013058	ENSGAFP00000009661	ENSGAFP00000022125	Uncharacterized protein.	Uncharacterized protein.	0.547
CCH79_00012352	ENSGAFP00000001899	ENSGAFP00000009661	ENSGAFP00000001899	Uncharacterized protein.	annotation not available	0.678