Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00012048S10_plectin domain-containing protein. (195 aa)    
Predicted Functional Partners:
ENSGAFP00000018104
annotation not available
 
      0.891
CCH79_00012720
Uncharacterized protein.
   
 0.847
ENSGAFP00000018094
annotation not available
 
      0.830
ENSGAFP00000018129
annotation not available
 
      0.794
DSC1
Uncharacterized protein.
   
 0.731
CCH79_00019129
Uncharacterized protein.
   
 0.722
ENSGAFP00000022923
annotation not available
 
      0.677
CCH79_00003466
Integrin beta.
   
 0.674
ENSGAFP00000001283
Integrin, beta 4.
   
 0.674
ENSGAFP00000011446
annotation not available
 
      0.674
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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