Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00017516Uncharacterized protein. (4208 aa)    
Predicted Functional Partners:
CCH79_00004669
PID domain-containing protein.
    
 0.933
CCH79_00005285
SSD domain-containing protein.
    
 0.915
ENSGAFP00000018334
Patched 1.
    
 0.914
CCH79_00004205
Uncharacterized protein.
     
 0.907
ENSGAFP00000028998
annotation not available
     
 0.907
ENSGAFP00000001689
Growth arrest-specific 1b.
     
 0.902
ENSGAFP00000003339
Low density lipoprotein receptor-related protein 2a.
  
  
 
0.902
ENSGAFP00000013920
annotation not available
     
 0.902
CCH79_00009032
Uncharacterized protein.
     
 0.902
MUSK
Receptor protein-tyrosine kinase.
   
 0.878
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
Server load: low (12%) [HD]