STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00017551Uncharacterized protein. (196 aa)    
Predicted Functional Partners:
CCH79_00020681
Uncharacterized protein.
   
 0.955
CCH79_00009538
Uncharacterized protein.
   
 0.948
RAC2
Uncharacterized protein.
    
 0.944
CCH79_00016405
Uncharacterized protein.
    
 0.940
CCH79_00016717
Uncharacterized protein.
    
 0.938
RAC1
Uncharacterized protein.
    
 0.938
ENSGAFP00000002419
annotation not available
   
 0.797
CDC42
Uncharacterized protein.
    
 0.789
ENSGAFP00000009867
annotation not available
    
 0.789
CCH79_00002008
WD_REPEATS_REGION domain-containing protein.
   
 0.747
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.