CCH79_00017551 protein (Gambusia affinis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

CCH79_00017551

Uncharacterized protein. (196 aa)

Predicted Functional Partners:

CCH79_00016405

0.960

CCH79_00016717

0.960

RAC2

0.960

CCH79_00016778

0.960

ENSGAFP00000018083

0.960

RAC1

0.960

CCH79_00020681

0.953

CCH79_00009538

0.953

CCH79_00004188

0.900

CDC42

0.871

Your Current Organism:

Gambusia affinis

NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCH79_00004188	CCH79_00009538	ENSGAFP00000010361	ENSGAFP00000017051	Uncharacterized protein.	Uncharacterized protein.	0.953
CCH79_00004188	CCH79_00016405	ENSGAFP00000010361	ENSGAFP00000012885	Uncharacterized protein.	Uncharacterized protein.	0.960
CCH79_00004188	CCH79_00016717	ENSGAFP00000010361	ENSGAFP00000013646	Uncharacterized protein.	Uncharacterized protein.	0.960
CCH79_00004188	CCH79_00016778	ENSGAFP00000010361	ENSGAFP00000018078	Uncharacterized protein.	Uncharacterized protein.	0.960
CCH79_00004188	CCH79_00017551	ENSGAFP00000010361	ENSGAFP00000001943	Uncharacterized protein.	Uncharacterized protein.	0.900
CCH79_00004188	CCH79_00020681	ENSGAFP00000010361	ENSGAFP00000002393	Uncharacterized protein.	Uncharacterized protein.	0.953
CCH79_00004188	CDC42	ENSGAFP00000010361	ENSGAFP00000007219	Uncharacterized protein.	Uncharacterized protein.	0.871
CCH79_00004188	ENSGAFP00000018083	ENSGAFP00000010361	ENSGAFP00000018083	Uncharacterized protein.	annotation not available	0.960
CCH79_00004188	RAC1	ENSGAFP00000010361	ENSGAFP00000030064	Uncharacterized protein.	Uncharacterized protein.	0.960
CCH79_00004188	RAC2	ENSGAFP00000010361	ENSGAFP00000017018	Uncharacterized protein.	Uncharacterized protein.	0.960
CCH79_00009538	CCH79_00004188	ENSGAFP00000017051	ENSGAFP00000010361	Uncharacterized protein.	Uncharacterized protein.	0.953
CCH79_00009538	CCH79_00017551	ENSGAFP00000017051	ENSGAFP00000001943	Uncharacterized protein.	Uncharacterized protein.	0.953
CCH79_00009538	CCH79_00020681	ENSGAFP00000017051	ENSGAFP00000002393	Uncharacterized protein.	Uncharacterized protein.	0.900
CCH79_00009538	CDC42	ENSGAFP00000017051	ENSGAFP00000007219	Uncharacterized protein.	Uncharacterized protein.	0.561
CCH79_00016405	CCH79_00004188	ENSGAFP00000012885	ENSGAFP00000010361	Uncharacterized protein.	Uncharacterized protein.	0.960
CCH79_00016405	CCH79_00017551	ENSGAFP00000012885	ENSGAFP00000001943	Uncharacterized protein.	Uncharacterized protein.	0.960
CCH79_00016405	CDC42	ENSGAFP00000012885	ENSGAFP00000007219	Uncharacterized protein.	Uncharacterized protein.	0.802
CCH79_00016717	CCH79_00004188	ENSGAFP00000013646	ENSGAFP00000010361	Uncharacterized protein.	Uncharacterized protein.	0.960
CCH79_00016717	CCH79_00017551	ENSGAFP00000013646	ENSGAFP00000001943	Uncharacterized protein.	Uncharacterized protein.	0.960
CCH79_00016717	CDC42	ENSGAFP00000013646	ENSGAFP00000007219	Uncharacterized protein.	Uncharacterized protein.	0.802