STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00010473Fork-head domain-containing protein. (380 aa)    
Predicted Functional Partners:
CCH79_00004754
TGF_BETA_2 domain-containing protein.
     
 0.632
CCH79_00005742
Homeobox domain-containing protein.
   
 0.603
CCH79_00000343
Uncharacterized protein.
   
 0.601
SPATA5
Uncharacterized protein; Belongs to the AAA ATPase family.
    
 
 0.597
ENSGAFP00000009632
annotation not available
   
 
 0.592
ENSGAFP00000019051
Homeobox B6a.
   
 
 0.592
ENSGAFP00000002636
GATA binding protein 5.
   
 0.579
CCH79_00015767
Homeobox domain-containing protein.
    
 0.573
CCH79_00005950
Homeobox domain-containing protein.
    
 0.554
CCH79_00016171
RRM domain-containing protein.
    
   0.534
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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