Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CCH79_00007251MPN domain-containing protein. (451 aa)    
Predicted Functional Partners:
ENSGAFP00000030422
Proteasome 26S subunit, non-ATPase 6.
   
 0.982
CCH79_00000221
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.981
CCH79_00010534
AAA domain-containing protein; Belongs to the AAA ATPase family.
  
 0.980
CCH79_00006357
PCI domain-containing protein.
   
 0.979
CCH79_00007748
Proteasome subunit alpha type.
   
 0.978
CCH79_00011807
Proteasome subunit alpha type.
   
 0.976
ENSGAFP00000010382
Proteasome 20S subunit alpha 5.
   
 0.976
CCH79_00020137
Proteasome subunit beta.
   
 0.976
CCH79_00012331
MPN domain-containing protein.
   
 0.974
ENSGAFP00000023963
Proteasome 26S subunit, non-ATPase 12.
   
 0.974
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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