OPRK1 protein (Gambusia affinis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

OPRK1

G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (374 aa)

Predicted Functional Partners:

CCH79_00004819

0.938

CCH79_00017336

0.926

CCH79_00020104

0.924

ENSGAFP00000003573

0.915

CCH79_00000357

0.906

CCH79_00020803

0.887

CCH79_00016583

0.721

CCH79_00017076

0.718

CCH79_00018343

0.683

CCH79_00005462

0.669

Your Current Organism:

Gambusia affinis

NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCH79_00000357	CCH79_00004819	ENSGAFP00000015292	ENSGAFP00000002330	Uncharacterized protein.	Uncharacterized protein.	0.919
CCH79_00000357	CCH79_00005462	ENSGAFP00000015292	ENSGAFP00000002503	Uncharacterized protein.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.906
CCH79_00000357	CCH79_00016583	ENSGAFP00000015292	ENSGAFP00000005141	Uncharacterized protein.	GALANIN domain-containing protein.	0.697
CCH79_00000357	CCH79_00017076	ENSGAFP00000015292	ENSGAFP00000000711	Uncharacterized protein.	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.883
CCH79_00000357	CCH79_00017336	ENSGAFP00000015292	ENSGAFP00000021712	Uncharacterized protein.	Uncharacterized protein.	0.937
CCH79_00000357	CCH79_00018343	ENSGAFP00000015292	ENSGAFP00000027508	Uncharacterized protein.	Somatostatin domain-containing protein.	0.744
CCH79_00000357	CCH79_00020104	ENSGAFP00000015292	ENSGAFP00000019731	Uncharacterized protein.	Uncharacterized protein.	0.959
CCH79_00000357	CCH79_00020803	ENSGAFP00000015292	ENSGAFP00000005871	Uncharacterized protein.	Uncharacterized protein.	0.892
CCH79_00000357	ENSGAFP00000003573	ENSGAFP00000015292	ENSGAFP00000003573	Uncharacterized protein.	annotation not available	0.903
CCH79_00000357	OPRK1	ENSGAFP00000015292	ENSGAFP00000001948	Uncharacterized protein.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.906
CCH79_00004819	CCH79_00000357	ENSGAFP00000002330	ENSGAFP00000015292	Uncharacterized protein.	Uncharacterized protein.	0.919
CCH79_00004819	CCH79_00005462	ENSGAFP00000002330	ENSGAFP00000002503	Uncharacterized protein.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.938
CCH79_00004819	CCH79_00016583	ENSGAFP00000002330	ENSGAFP00000005141	Uncharacterized protein.	GALANIN domain-containing protein.	0.761
CCH79_00004819	CCH79_00017076	ENSGAFP00000002330	ENSGAFP00000000711	Uncharacterized protein.	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.993
CCH79_00004819	CCH79_00017336	ENSGAFP00000002330	ENSGAFP00000021712	Uncharacterized protein.	Uncharacterized protein.	0.932
CCH79_00004819	CCH79_00018343	ENSGAFP00000002330	ENSGAFP00000027508	Uncharacterized protein.	Somatostatin domain-containing protein.	0.705
CCH79_00004819	CCH79_00020104	ENSGAFP00000002330	ENSGAFP00000019731	Uncharacterized protein.	Uncharacterized protein.	0.954
CCH79_00004819	CCH79_00020803	ENSGAFP00000002330	ENSGAFP00000005871	Uncharacterized protein.	Uncharacterized protein.	0.928
CCH79_00004819	ENSGAFP00000003573	ENSGAFP00000002330	ENSGAFP00000003573	Uncharacterized protein.	annotation not available	0.928
CCH79_00004819	OPRK1	ENSGAFP00000002330	ENSGAFP00000001948	Uncharacterized protein.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.938