Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00006482MARVEL domain-containing protein. (153 aa)    
Predicted Functional Partners:
CCH79_00005895
Uncharacterized protein.
   
  
 0.781
CCH79_00002038
Uncharacterized protein.
   
  
 0.722
CCH79_00019782
MARVEL domain-containing protein.
      
 0.714
PDCL3
Phosducin like 3.
      
 0.677
ENSGAFP00000030274
succinate-CoA ligase, GDP-forming, beta subunit.
      
 0.620
CCH79_00011389
Uroporphyrinogen_deCOase domain-containing protein.
      
 0.615
CCH79_00020151
MARVEL domain-containing protein.
      
 0.596
CCH79_00005025
MARVEL domain-containing protein.
      
 0.573
CCH79_00007574
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
    
 
 0.572
ENSGAFP00000021153
Interferon regulatory factor 3.
      
 0.495
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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