STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00007036Uncharacterized protein. (324 aa)    
Predicted Functional Partners:
ENSGAFP00000000124
Eukaryotic translation initiation factor 5B.
    
 
 0.869
ENSGAFP00000006991
Ras association domain family member 5.
    
 
 0.835
CCH79_00008760
Uncharacterized protein.
   
 0.807
ENSGAFP00000021648
annotation not available
   
 0.807
CCH79_00009012
Uncharacterized protein.
    
   0.726
ACSF3
AMP-binding domain-containing protein.
      
 0.717
CCH79_00000340
Uncharacterized protein.
      
 0.716
ENSGAFP00000000750
annotation not available
      
 0.628
ENSGAFP00000031949
Proprotein convertase subtilisin/kexin type 1.
      
 0.628
CCH79_00007961
Uncharacterized protein.
    
 
 0.626
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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