Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAFP00000001995SLIT and NTRK-like family, member 5b. (449 aa)    
Predicted Functional Partners:
CCH79_00016359
Uncharacterized protein.
  
 
  0.578
CCH79_00015328
Uncharacterized protein.
 
 
  0.578
CCH79_00008828
Uncharacterized protein.
  
 
  0.573
ENSGAFP00000013011
Leucine rich repeat containing 18a.
  
 
  0.572
CCH79_00010070
Uncharacterized protein.
  
 
  0.571
CCH79_00009652
Uncharacterized protein.
  
 
  0.565
ENSGAFP00000002477
Leucine rich repeat containing 39.
  
 
  0.557
CCH79_00007761
Uncharacterized protein.
  
 
  0.554
ENSGAFP00000010954
annotation not available
   
 0.548
CCH79_00002099
Uncharacterized protein.
   
 0.548
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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