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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00004071Uncharacterized protein. (220 aa)    
Predicted Functional Partners:
CCH79_00018478
Uncharacterized protein.
   
 0.985
VPS4B
Uncharacterized protein; Belongs to the AAA ATPase family.
   
 0.980
CCH79_00010178
Uncharacterized protein; Belongs to the AAA ATPase family.
   
 0.980
CCH79_00003349
Uncharacterized protein.
   
 0.974
CCH79_00011211
Uncharacterized protein; Belongs to the AAA ATPase family.
   
 0.962
CCH79_00015986
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
   
 0.952
CCH79_00005463
Uncharacterized protein.
  
  
 
0.951
CCH79_00004434
Uncharacterized protein.
   
 0.951
CCH79_00005044
Uncharacterized protein.
    
 
 0.941
CCH79_00004095
Uncharacterized protein.
  
0.917
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.