CCH79_00020765 protein (Gambusia affinis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CCH79_00020765

Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (256 aa)

Predicted Functional Partners:

AQP11

0.917

CCH79_00018207

0.880

ENSGAFP00000031967

0.875

CCH79_00008698

0.803

AQP4

0.796

CCH79_00006807

0.781

CCH79_00010740

0.769

CCH79_00006822

0.769

CCH79_00005420

0.768

CCH79_00010997

0.760

Your Current Organism:

Gambusia affinis

NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AQP11	AQP4	ENSGAFP00000015689	ENSGAFP00000031757	Aquaporin; Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	0.822
AQP11	CCH79_00005420	ENSGAFP00000015689	ENSGAFP00000031887	Aquaporin; Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	0.847
AQP11	CCH79_00006807	ENSGAFP00000015689	ENSGAFP00000013894	Aquaporin; Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	0.835
AQP11	CCH79_00008698	ENSGAFP00000015689	ENSGAFP00000008950	Aquaporin; Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	0.799
AQP11	CCH79_00010740	ENSGAFP00000015689	ENSGAFP00000008484	Aquaporin; Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	0.824
AQP11	CCH79_00010997	ENSGAFP00000015689	ENSGAFP00000022191	Aquaporin; Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	0.897
AQP11	CCH79_00020765	ENSGAFP00000015689	ENSGAFP00000002002	Aquaporin; Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	0.917
AQP11	ENSGAFP00000031967	ENSGAFP00000015689	ENSGAFP00000031967	Aquaporin; Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.	Aquaporin 7.	0.799
AQP4	AQP11	ENSGAFP00000031757	ENSGAFP00000015689	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	Aquaporin; Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.	0.822
AQP4	CCH79_00005420	ENSGAFP00000031757	ENSGAFP00000031887	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	0.573
AQP4	CCH79_00006807	ENSGAFP00000031757	ENSGAFP00000013894	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	0.662
AQP4	CCH79_00006822	ENSGAFP00000031757	ENSGAFP00000013993	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	Arrestin_C domain-containing protein.	0.712
AQP4	CCH79_00008698	ENSGAFP00000031757	ENSGAFP00000008950	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	0.620
AQP4	CCH79_00010740	ENSGAFP00000031757	ENSGAFP00000008484	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	0.543
AQP4	CCH79_00010997	ENSGAFP00000031757	ENSGAFP00000022191	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	0.696
AQP4	CCH79_00018207	ENSGAFP00000031757	ENSGAFP00000022674	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	Uncharacterized protein.	0.799
AQP4	CCH79_00020765	ENSGAFP00000031757	ENSGAFP00000002002	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	0.796
AQP4	ENSGAFP00000031967	ENSGAFP00000031757	ENSGAFP00000031967	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	Aquaporin 7.	0.612
CCH79_00005420	AQP11	ENSGAFP00000031887	ENSGAFP00000015689	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	Aquaporin; Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.	0.847
CCH79_00005420	AQP4	ENSGAFP00000031887	ENSGAFP00000031757	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	0.573