STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00004072RAP domain-containing protein. (666 aa)    
Predicted Functional Partners:
CCH79_00002744
RAP domain-containing protein.
    
 
 0.909
CCH79_00004959
Protein kinase domain-containing protein.
    
   0.835
CCH79_00013189
RAP domain-containing protein.
   
 
 0.793
CCH79_00001993
Uncharacterized protein.
    
 
 0.774
CCH79_00012866
Amidase domain-containing protein.
   
   0.750
CCH79_00004254
Uncharacterized protein.
  
  
 0.738
CCH79_00012165
Uncharacterized protein.
   
 
 0.730
CCH79_00005370
Uncharacterized protein.
    
 
 0.703
CCH79_00004683
Uncharacterized protein.
  
 
 0.697
CCH79_00013836
Uncharacterized protein.
    
 
 0.690
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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