STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAFP00000002040C9orf72-SMCR8 complex subunit. (462 aa)    
Predicted Functional Partners:
CCH79_00013696
UDENN FLCN/SMCR8-type domain-containing protein.
    
 0.995
CCH79_00013835
UDENN FLCN/SMCR8-type domain-containing protein.
    
 0.994
ENSGAFP00000004160
WD repeat domain 41.
    
 0.993
ENSGAFP00000004181
annotation not available
    
 0.983
CCH79_00005395
ATG11 domain-containing protein.
    
 0.978
CCH79_00013159
Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily.
  
 
 0.969
CCH79_00018302
Uncharacterized protein.
    
 0.967
CCH79_00018212
Uncharacterized protein.
    
 0.965
CCH79_00007178
Uncharacterized protein.
    
 0.964
CCH79_00015859
Uncharacterized protein.
    
 0.961
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.