STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAFP00000002051RAR-related orphan receptor C a. (474 aa)    
Predicted Functional Partners:
ENSGAFP00000006858
Nuclear receptor corepressor 2.
    
 0.751
CCH79_00002159
SANT domain-containing protein.
    
 0.751
ENSGAFP00000024072
Nuclear receptor interacting protein 1b.
    
 0.674
CCH79_00006915
Uncharacterized protein.
  
  
 
0.655
CCH79_00012965
Uncharacterized protein.
    
 0.615
CCH79_00011435
Uncharacterized protein.
    
 0.615
CCH79_00016017
Uncharacterized protein.
    
 0.615
ENSGAFP00000023321
UV radiation resistance associated gene.
      
 0.598
CCH79_00007819
Uncharacterized protein.
      
 0.598
CCH79_00010023
Link domain-containing protein.
      
 0.598
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.