STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00016183Flavin-containing monooxygenase. (430 aa)    
Predicted Functional Partners:
CCH79_00004504
Uncharacterized protein.
  
 0.668
CCH79_00001367
FAD_binding_3 domain-containing protein.
  
 0.662
COQ3
Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.
    
 0.660
CCH79_00005158
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
    
 0.657
CCH79_00020045
AB hydrolase-1 domain-containing protein.
  
 0.653
ENSGAFP00000016300
Arylformamidase.
  
 
 0.636
CCH79_00011585
Uncharacterized protein.
  
 
 0.633
CCH79_00009506
Uncharacterized protein.
  
 
 0.633
CCH79_00003931
Uncharacterized protein.
  
 
 0.633
CCH79_00017867
Uncharacterized protein.
  
 
 0.633
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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