STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00008276Peptidylprolyl isomerase. (564 aa)    
Predicted Functional Partners:
CCH79_00011765
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
 0.656
CCH79_00000489
HATPase_c domain-containing protein.
   
 0.606
CCH79_00018225
Uncharacterized protein.
    
 0.573
ENSGAFP00000004897
annotation not available
    
 0.573
ENSGAFP00000004926
annotation not available
    
 0.573
CCH79_00015757
Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.
   
 
 0.573
RYR2
Uncharacterized protein.
    
 0.573
ENSGAFP00000018185
Ryanodine receptor 2b (cardiac).
    
 0.573
CCH79_00018223
Uncharacterized protein.
    
 0.573
RYR3
Uncharacterized protein.
    
 0.573
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.