STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00018873Uncharacterized protein. (269 aa)    
Predicted Functional Partners:
CCH79_00009825
Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.
  
 0.999
ENSGAFP00000010680
Ribonuclease P 21 subunit.
   
 0.999
POP1
Uncharacterized protein.
   
 0.999
ENSGAFP00000015248
Ribonuclease P and MRP subunit p25, b.
    
 0.998
ENSGAFP00000006172
annotation not available
    
 0.997
ENSGAFP00000011927
annotation not available
   
 0.997
CCH79_00018060
POP4 domain-containing protein.
   
 0.996
ENSGAFP00000005245
annotation not available
   
 0.996
CCH79_00010850
S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family.
   
  0.987
CCH79_00020728
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
  0.986
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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