STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCNC4Ion_trans domain-containing protein; Belongs to the potassium channel family. (591 aa)    
Predicted Functional Partners:
CCH79_00000140
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.960
CCH79_00001872
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
  
 0.817
CCH79_00013183
Uncharacterized protein.
   
 0.815
ENSGAFP00000015374
Ribosomal protein L30.
  
 0.815
CCH79_00009966
Uncharacterized protein.
  
 0.814
ENSGAFP00000019092
Ribosomal protein L29.
   
 0.813
ENSGAFP00000031570
Ribosomal protein L24.
  
 0.813
CCH79_00006694
Uncharacterized protein.
  
 0.812
CCH79_00019762
Uncharacterized protein.
   
 0.810
CCH79_00005716
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.
  
 0.805
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.