STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00005827Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (343 aa)    
Predicted Functional Partners:
CCH79_00015250
Uncharacterized protein.
   
 
 0.660
CCH79_00016589
Uncharacterized protein.
   
 
 0.605
CCH79_00017621
SKA2 domain-containing protein.
   
 
 0.594
CLSPN
Uncharacterized protein.
   
 
 0.558
CCH79_00011656
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
0.544
ENSGAFP00000004722
Timeless circadian clock.
   
 
 0.535
CCH79_00018913
TIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family.
   
 
 0.532
CCH79_00016819
Uncharacterized protein.
   
   0.524
CCH79_00018133
Uncharacterized protein.
    
 
 0.523
SMARCAL1
Uncharacterized protein.
    
 
 0.523
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.