STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00007042Uncharacterized protein. (486 aa)    
Predicted Functional Partners:
CCH79_00017132
Uncharacterized protein.
  
 
 
 0.884
ENSGAFP00000019102
PARK2 co-regulated.
  
 
 
 0.883
ENSGAFP00000013310
methyl-CpG binding domain protein 1b.
   
 0.882
ENSGAFP00000011611
annotation not available
    
 
 0.876
CCH79_00003263
Uncharacterized protein.
   
 
 0.867
CCH79_00002747
Uncharacterized protein.
   
  0.865
CCH79_00003635
Uncharacterized protein.
   
  0.861
CCH79_00020546
Uncharacterized protein.
    
 
 0.861
CCH79_00019945
Uncharacterized protein.
    
   0.859
CCH79_00008730
DUF667 domain-containing protein.
    
   0.859
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.