Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00007042Uncharacterized protein. (486 aa)    
Predicted Functional Partners:
CCH79_00020225
Uncharacterized protein.
   
   0.966
ENSGAFP00000019156
EF-hand domain (C-terminal) containing 1.
   
 
 0.960
CCH79_00012251
Uncharacterized protein.
   
 0.958
ENSGAFP00000011611
annotation not available
   
 
 0.954
CCH79_00008730
DUF667 domain-containing protein.
    
 
 0.943
CCH79_00017132
Uncharacterized protein.
  
 
 0.942
ENSGAFP00000019102
PARK2 co-regulated.
  
 
 0.936
RSPH1
Uncharacterized protein.
   
 
 0.929
CCH79_00002747
Uncharacterized protein.
   
  0.925
CCH79_00020546
Uncharacterized protein.
   
 
 0.923
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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