STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00016435SEC7 domain-containing protein. (1499 aa)    
Predicted Functional Partners:
CCH79_00018314
SEC7 domain-containing protein.
   
 
0.833
CCH79_00019641
Uncharacterized protein.
    
 0.815
CCH79_00014366
Uncharacterized protein.
    
 0.815
CCH79_00001108
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
    
   0.686
CCH79_00000142
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
   
 0.639
ENSGAFP00000023260
ADP-ribosylation factor 6b.
   
 0.639
CCH79_00000053
J domain-containing protein.
   
  
 0.610
CCH79_00017249
Uncharacterized protein.
    
 0.593
CCH79_00008303
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.593
ENSGAFP00000004095
annotation not available
    
 0.593
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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