STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00001844Uncharacterized protein. (725 aa)    
Predicted Functional Partners:
CCH79_00001843
Aamy domain-containing protein.
  
  
 0.633
CCH79_00015352
Uncharacterized protein.
      
 0.587
ENSGAFP00000012552
Splicing factor 3a, subunit 2.
      
 0.587
CCH79_00005202
PH domain-containing protein.
      
 0.587
CCH79_00010176
Uncharacterized protein.
      
 0.587
ENSGAFP00000002215
Calmodulin-lysine N-methyltransferase.
      
 0.583
CCH79_00000948
Uncharacterized protein.
      
 0.543
CCH79_00018113
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
      
 0.515
ENSGAFP00000025745
Gamma-aminobutyric acid (GABA) A receptor, alpha 5.
      
 0.515
CCH79_00001695
Uncharacterized protein.
      
 0.514
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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