STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAFP00000002215Calmodulin-lysine N-methyltransferase. (338 aa)    
Predicted Functional Partners:
CCH79_00007273
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
     
 0.889
SMYD3
SET domain-containing protein.
     
 0.881
CCH79_00016681
SET domain-containing protein.
     
 0.880
CCH79_00017912
Uncharacterized protein.
     
 0.879
CCH79_00008673
Uncharacterized protein.
     
 0.875
ENSGAFP00000005993
Lysine methyltransferase 5Aa.
     
 0.874
CCH79_00010546
Uncharacterized protein.
     
 0.874
CCH79_00000355
Uncharacterized protein.
     
 0.874
CCH79_00009118
SET domain-containing protein.
     
 0.874
ENSGAFP00000028382
PR domain containing 2, with ZNF domain a.
     
 0.873
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.