CCH79_00016338 protein (Gambusia affinis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CCH79_00016338

Uncharacterized protein. (359 aa)

Predicted Functional Partners:

ENSGAFP00000032076

0.950

CCH79_00008806

0.804

CCH79_00020144

0.804

CAPZA2

0.731

CCH79_00014798

0.731

CCH79_00015622

0.715

CCH79_00001300

0.704

ENSGAFP00000005515

0.702

ACTA1

0.702

CCH79_00016687

0.702

Your Current Organism:

Gambusia affinis

NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACTA1	CAPZA2	ENSGAFP00000008096	ENSGAFP00000006349	Uncharacterized protein.	Uncharacterized protein; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.682
ACTA1	CCH79_00001300	ENSGAFP00000008096	ENSGAFP00000011742	Uncharacterized protein.	Uncharacterized protein.	0.749
ACTA1	CCH79_00008806	ENSGAFP00000008096	ENSGAFP00000016263	Uncharacterized protein.	Adenylyl cyclase-associated protein; Belongs to the CAP family.	0.671
ACTA1	CCH79_00014798	ENSGAFP00000008096	ENSGAFP00000009516	Uncharacterized protein.	F-actin-capping protein subunit alpha; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.682
ACTA1	CCH79_00015622	ENSGAFP00000008096	ENSGAFP00000023968	Uncharacterized protein.	Uncharacterized protein.	0.682
ACTA1	CCH79_00016338	ENSGAFP00000008096	ENSGAFP00000002251	Uncharacterized protein.	Uncharacterized protein.	0.702
ACTA1	CCH79_00020144	ENSGAFP00000008096	ENSGAFP00000025551	Uncharacterized protein.	Adenylyl cyclase-associated protein; Belongs to the CAP family.	0.671
ACTA1	ENSGAFP00000032076	ENSGAFP00000008096	ENSGAFP00000032076	Uncharacterized protein.	Capping actin protein of muscle Z-line subunit beta.	0.855
CAPZA2	ACTA1	ENSGAFP00000006349	ENSGAFP00000008096	Uncharacterized protein; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Uncharacterized protein.	0.682
CAPZA2	CCH79_00001300	ENSGAFP00000006349	ENSGAFP00000011742	Uncharacterized protein; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Uncharacterized protein.	0.945
CAPZA2	CCH79_00014798	ENSGAFP00000006349	ENSGAFP00000009516	Uncharacterized protein; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	F-actin-capping protein subunit alpha; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.967
CAPZA2	CCH79_00016338	ENSGAFP00000006349	ENSGAFP00000002251	Uncharacterized protein; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Uncharacterized protein.	0.731
CAPZA2	CCH79_00016687	ENSGAFP00000006349	ENSGAFP00000010687	Uncharacterized protein; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Uncharacterized protein; Belongs to the actin family.	0.682
CAPZA2	ENSGAFP00000005515	ENSGAFP00000006349	ENSGAFP00000005515	Uncharacterized protein; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	annotation not available	0.682
CAPZA2	ENSGAFP00000032076	ENSGAFP00000006349	ENSGAFP00000032076	Uncharacterized protein; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Capping actin protein of muscle Z-line subunit beta.	0.989
CCH79_00001300	ACTA1	ENSGAFP00000011742	ENSGAFP00000008096	Uncharacterized protein.	Uncharacterized protein.	0.749
CCH79_00001300	CAPZA2	ENSGAFP00000011742	ENSGAFP00000006349	Uncharacterized protein.	Uncharacterized protein; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.945
CCH79_00001300	CCH79_00008806	ENSGAFP00000011742	ENSGAFP00000016263	Uncharacterized protein.	Adenylyl cyclase-associated protein; Belongs to the CAP family.	0.671
CCH79_00001300	CCH79_00014798	ENSGAFP00000011742	ENSGAFP00000009516	Uncharacterized protein.	F-actin-capping protein subunit alpha; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.945
CCH79_00001300	CCH79_00015622	ENSGAFP00000011742	ENSGAFP00000023968	Uncharacterized protein.	Uncharacterized protein.	0.682