STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAFP00000002291PTK6 protein tyrosine kinase 6b. (504 aa)    
Predicted Functional Partners:
CCH79_00005858
SH2 domain-containing protein.
   
 0.864
ENSGAFP00000000112
annotation not available
   
 0.809
ENSGAFP00000010254
annotation not available
   
 0.781
CCH79_00008778
Uncharacterized protein.
    
 0.770
CCH79_00014736
Uncharacterized protein.
    
0.765
CCH79_00010948
Uncharacterized protein.
   
 0.761
ENSGAFP00000032173
Caveolin 3.
    
 0.761
CCH79_00011579
Uncharacterized protein.
    
 0.755
CCH79_00011907
Uncharacterized protein.
    
 0.755
ENSGAFP00000016164
Cbl proto-oncogene, E3 ubiquitin protein ligase.
    
 0.755
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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