Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00003640Uncharacterized protein. (4579 aa)    
Predicted Functional Partners:
CCH79_00018657
Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.
   
 0.832
CCH79_00005744
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.801
ENSGAFP00000020766
Aurora kinase A.
   
 0.801
CCH79_00015332
Uncharacterized protein.
   
 0.789
CCH79_00009024
Uncharacterized protein.
   
 0.787
ENSGAFP00000023928
Cell division cycle associated 8.
   
 0.766
CCH79_00013442
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 0.766
UBE3A
HECT domain-containing protein.
    
 
 0.750
CCH79_00011111
HECT domain-containing protein.
    
 
 0.740
CCH79_00013687
Uncharacterized protein.
    
 0.695
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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