CCH79_00001368 protein (Gambusia affinis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CCH79_00001368

Uncharacterized protein. (986 aa)

Predicted Functional Partners:

ENSGAFP00000021072

0.953

ENSGAFP00000006885

0.951

CCH79_00005979

0.947

CCH79_00017606

0.947

APP

0.920

CCH79_00002647

0.920

CCH79_00017103

0.890

CCH79_00017102

0.883

ENSGAFP00000014929

0.883

ENSGAFP00000011060

0.833

Your Current Organism:

Gambusia affinis

NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APP	CCH79_00001368	ENSGAFP00000009168	ENSGAFP00000002338	BPTI/Kunitz inhibitor domain-containing protein.	Uncharacterized protein.	0.920
CCH79_00001368	APP	ENSGAFP00000002338	ENSGAFP00000009168	Uncharacterized protein.	BPTI/Kunitz inhibitor domain-containing protein.	0.920
CCH79_00001368	CCH79_00002647	ENSGAFP00000002338	ENSGAFP00000031598	Uncharacterized protein.	BPTI/Kunitz inhibitor domain-containing protein.	0.920
CCH79_00001368	CCH79_00005979	ENSGAFP00000002338	ENSGAFP00000010904	Uncharacterized protein.	IlGF domain-containing protein; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver.	0.947
CCH79_00001368	CCH79_00017102	ENSGAFP00000002338	ENSGAFP00000003024	Uncharacterized protein.	Uncharacterized protein.	0.883
CCH79_00001368	CCH79_00017103	ENSGAFP00000002338	ENSGAFP00000003032	Uncharacterized protein.	Uncharacterized protein.	0.890
CCH79_00001368	CCH79_00017606	ENSGAFP00000002338	ENSGAFP00000021922	Uncharacterized protein.	Insulin; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver.	0.947
CCH79_00001368	ENSGAFP00000006885	ENSGAFP00000002338	ENSGAFP00000006885	Uncharacterized protein.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.951
CCH79_00001368	ENSGAFP00000011060	ENSGAFP00000002338	ENSGAFP00000011060	Uncharacterized protein.	annotation not available	0.833
CCH79_00001368	ENSGAFP00000014929	ENSGAFP00000002338	ENSGAFP00000014929	Uncharacterized protein.	Transforming growth factor, alpha.	0.883
CCH79_00001368	ENSGAFP00000021072	ENSGAFP00000002338	ENSGAFP00000021072	Uncharacterized protein.	Ribosomal protein S27a.	0.953
CCH79_00002647	CCH79_00001368	ENSGAFP00000031598	ENSGAFP00000002338	BPTI/Kunitz inhibitor domain-containing protein.	Uncharacterized protein.	0.920
CCH79_00005979	CCH79_00001368	ENSGAFP00000010904	ENSGAFP00000002338	IlGF domain-containing protein; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver.	Uncharacterized protein.	0.947
CCH79_00005979	CCH79_00017606	ENSGAFP00000010904	ENSGAFP00000021922	IlGF domain-containing protein; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver.	Insulin; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver.	0.891
CCH79_00005979	ENSGAFP00000014929	ENSGAFP00000010904	ENSGAFP00000014929	IlGF domain-containing protein; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver.	Transforming growth factor, alpha.	0.750
CCH79_00017102	CCH79_00001368	ENSGAFP00000003024	ENSGAFP00000002338	Uncharacterized protein.	Uncharacterized protein.	0.883
CCH79_00017102	CCH79_00017103	ENSGAFP00000003024	ENSGAFP00000003032	Uncharacterized protein.	Uncharacterized protein.	0.970
CCH79_00017103	CCH79_00001368	ENSGAFP00000003032	ENSGAFP00000002338	Uncharacterized protein.	Uncharacterized protein.	0.890
CCH79_00017103	CCH79_00017102	ENSGAFP00000003032	ENSGAFP00000003024	Uncharacterized protein.	Uncharacterized protein.	0.970
CCH79_00017606	CCH79_00001368	ENSGAFP00000021922	ENSGAFP00000002338	Insulin; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver.	Uncharacterized protein.	0.947