STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00000506Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (323 aa)    
Predicted Functional Partners:
CCH79_00015244
PKS_AT domain-containing protein.
  
 0.733
ENSGAFP00000004163
3-oxoacyl-ACP synthase, mitochondrial.
  
 0.716
ENSGAFP00000009346
annotation not available
  
 0.709
CCH79_00020233
FAD-binding FR-type domain-containing protein.
  
 0.709
CCH79_00012455
2Fe-2S ferredoxin-type domain-containing protein.
  
 0.708
CCH79_00018829
2Fe-2S ferredoxin-type domain-containing protein.
  
 0.708
CCH79_00016753
Uncharacterized protein.
  
 0.662
CCH79_00016732
Carrier domain-containing protein.
  
 0.646
CCH79_00004012
Carrier domain-containing protein.
  
 0.646
CCH79_00004013
Carrier domain-containing protein.
  
 0.646
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.