STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00020287Uncharacterized protein. (123 aa)    
Predicted Functional Partners:
RIMS2
Uncharacterized protein.
    
 0.921
ENSGAFP00000018943
annotation not available
    
 0.921
CCH79_00014069
Uncharacterized protein.
    
 0.921
CCH79_00016155
Uncharacterized protein.
    
 0.748
CCH79_00006541
Uncharacterized protein.
   
 0.708
CCH79_00015569
Uncharacterized protein.
   
 0.708
ENSGAFP00000024136
annotation not available
   
 0.708
CCH79_00014944
Uncharacterized protein.
   
 0.708
CCH79_00012258
Uncharacterized protein.
   
 0.704
CCH79_00006377
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
   
 0.684
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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