STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00005722tRNA-synt_1g domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (598 aa)    
Predicted Functional Partners:
CCH79_00004814
Uncharacterized protein.
  
 0.999
ENSGAFP00000019928
methionyl-tRNA synthetase 1.
   
0.986
CCH79_00020484
Formyl_trans_N domain-containing protein.
    
 0.967
ENSGAFP00000003336
leucyl-tRNA synthetase 2, mitochondrial.
  
 0.935
CCH79_00002430
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.935
CCH79_00015014
Uncharacterized protein.
  
 
 0.932
CCH79_00009153
tRNA-binding domain-containing protein.
 
  
 0.920
CCH79_00016702
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
 
 0.919
CCH79_00015442
GST C-terminal domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.919
CCH79_00008519
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.918
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.