STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UFC1Ubiquitin-fold modifier conjugating enzyme 1. (118 aa)    
Predicted Functional Partners:
ENSGAFP00000005700
Ubiquitin-like modifier activating enzyme 5.
    
 
 0.976
ENSGAFP00000028843
Ubiquitin-fold modifier 1.
   
 
 0.942
CCH79_00019553
Uncharacterized protein.
    
 
 0.813
CCH79_00020032
Uncharacterized protein.
    
 
 0.804
CCH79_00004638
Rhodanese domain-containing protein.
    
 
 0.742
ENSGAFP00000026126
UFM1-specific peptidase 1 (non-functional).
  
  
 0.659
CCH79_00003336
Uncharacterized protein.
   
 
 0.653
ENSGAFP00000006083
SUMO1 activating enzyme subunit 1.
    
 
 0.643
UBA3
E2_bind domain-containing protein.
    
 
 0.635
ENSGAFP00000030314
Ubiquitin-like modifier activating enzyme 3.
    
 
 0.635
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.