STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00001374Uncharacterized protein; Belongs to the cyclin family. (354 aa)    
Predicted Functional Partners:
CCH79_00009260
Uncharacterized protein.
   
 0.919
ENSGAFP00000007624
S-phase kinase-associated protein 2, E3 ubiquitin protein ligase.
   
 0.877
CCH79_00017306
CDT1 domain-containing protein.
   
 0.873
CCH79_00002477
Uncharacterized protein; Belongs to the SKP1 family.
    
 0.855
ENSGAFP00000028974
Ubiquitin-conjugating enzyme E2C.
   
 0.850
CCH79_00009563
Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication.
   
 0.844
CCH79_00015790
APC1_C domain-containing protein.
    
 0.833
CCH79_00011168
Uncharacterized protein.
    
 0.832
CCH79_00019248
TPR_REGION domain-containing protein.
    
 0.829
CCH79_00012846
PDZ domain-containing protein.
   
 0.823
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.