STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00007052DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1126 aa)    
Predicted Functional Partners:
CCH79_00003173
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
0.999
CCH79_00001522
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
 
0.992
CCH79_00007041
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.983
CCH79_00001311
DNA_mis_repair domain-containing protein.
 
 0.983
ENSGAFP00000015899
PMS1 homolog 1, mismatch repair system component.
 
 0.972
ENSGAFP00000025186
annotation not available
 
 0.969
CCH79_00016745
Uncharacterized protein.
 
 0.966
CCH79_00008229
PX domain-containing protein.
   
   0.953
CCH79_00004523
WW domain-containing protein.
  
 0.943
ENSGAFP00000003099
annotation not available
   
 
 0.887
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.