STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00020727RNase H domain-containing protein. (295 aa)    
Predicted Functional Partners:
CCH79_00012465
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
  
 
 0.964
CCH79_00014909
Uncharacterized protein.
   
 
 0.940
CCH79_00004081
Thymidylat_synt domain-containing protein.
  
 
 0.933
CCH79_00007041
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
    
 0.891
CCH79_00007410
Glyceraldehyde-3-phosphate dehydrogenase.
  
 
 0.879
CCH79_00010917
Glyceraldehyde-3-phosphate dehydrogenase.
  
 
 0.879
CCH79_00016236
Uncharacterized protein.
   
 0.879
CCH79_00014154
Gp_dh_N domain-containing protein; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
    
 0.878
ENSGAFP00000011020
annotation not available
    
 0.872
CCH79_00018874
Nudix hydrolase domain-containing protein.
    
  0.855
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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