STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00000510Uncharacterized protein. (180 aa)    
Predicted Functional Partners:
ENSGAFP00000010382
Proteasome 20S subunit alpha 5.
    
   0.872
CCH79_00011807
Proteasome subunit alpha type.
    
   0.852
CCH79_00007428
Proteasome endopeptidase complex.
    
   0.842
CCH79_00004850
Proteasome subunit beta; Belongs to the peptidase T1B family.
    
   0.827
CCH79_00020137
Proteasome subunit beta.
    
   0.813
CCH79_00014033
Proteasome subunit beta.
    
   0.799
CCH79_00005339
Proteasome subunit alpha type.
    
   0.695
ARHGEF2
Rho/Rac guanine nucleotide exchange factor 2.
    
 
 0.667
CCH79_00010535
Proteasome subunit beta.
    
   0.660
CCH79_00007748
Proteasome subunit alpha type.
    
   0.660
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.