STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00007269Uncharacterized protein. (398 aa)    
Predicted Functional Partners:
CCH79_00002146
TPR_REGION domain-containing protein.
  
 0.938
CCH79_00009024
Uncharacterized protein.
   
 0.908
CCH79_00014360
J domain-containing protein.
   
 0.907
CCH79_00018993
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
  
 0.890
ENSGAFP00000016420
Heat shock protein 5.
   
 0.874
CLPB
ANK_REP_REGION domain-containing protein.
  
 
 0.868
CCH79_00017144
Uncharacterized protein.
  
 0.865
CCH79_00001557
BAG domain-containing protein.
    
 0.856
CCH79_00018726
Uncharacterized protein.
  
 0.852
CCH79_00000489
HATPase_c domain-containing protein.
  
 0.852
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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