STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00002734Uncharacterized protein. (1514 aa)    
Predicted Functional Partners:
CCH79_00004781
Uncharacterized protein.
  
  
 
0.937
ENSGAFP00000000806
Glucosidase, alpha; neutral AB.
   
 
 0.767
CCH79_00014000
Uncharacterized protein.
    
 
 0.714
CCH79_00017144
Uncharacterized protein.
   
 
 0.701
CCH79_00018396
Uncharacterized protein.
   
 
 0.667
CCH79_00005508
Uncharacterized protein.
   
 
 0.667
CCH79_00017045
Sep15_SelM domain-containing protein.
    
 
 0.641
CCH79_00009454
Alpha-1,3-glucosyltransferase; Belongs to the ALG6/ALG8 glucosyltransferase family.
    
 
 0.637
ENSGAFP00000015804
ER degradation enhancer, mannosidase alpha-like 2.
   
 
 0.589
CCH79_00016879
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across t [...]
   
 
 0.566
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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