STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00003488Uncharacterized protein. (323 aa)    
Predicted Functional Partners:
CCH79_00004299
Uncharacterized protein.
 
  
  0.752
CCH79_00017169
Uncharacterized protein.
    
 0.739
CCH79_00004240
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
    
 0.719
ENSGAFP00000022428
NEDD8 ubiquitin like modifier, like.
    
  0.708
CCH79_00004477
COMM domain-containing protein.
   
  0.703
CCH79_00003696
RING-type domain-containing protein.
    
 0.700
CCH79_00020474
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
    
  0.684
CCH79_00013931
Uncharacterized protein.
    
  0.681
CCH79_00012863
Phosphatidylinositol 3-kinase catalytic subunit type 3.
     
 0.668
CCH79_00014501
Uncharacterized protein.
 
   
  0.665
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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